PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS66593.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 181aa    MW: 20036.8 Da    PI: 10.3471
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS66593.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.31.4e-0872119455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++iN ++  L+el+P +    +k    a +L   ++++++Lq
  EPS66593.1  72 NHSLAERARREKINARMKLLQELVPGC----NKISGTALVLDGIINHVQDLQ 119
                 8*************************9....777888888888888888887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.5E-1566137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.38E-966123No hitNo description
PROSITE profilePS5088813.9668118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.9E-672119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.1E-1472135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.9E-774124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
SNNGWIPIPA PFCFLRRFQI GIRTLASESI GRNSRSSFQV GDPTRKSGSN GGSSEKLPYV  60
HVRARRGQAT GNHSLAERAR REKINARMKL LQELVPGCNK ISGTALVLDG IINHVQDLQR  120
QVEFLSMRLA AVDPRIDFNL DHLIAAESAV AIDSSNGGVF SLPIWPENEI SLMTRQHHQC  180
Q
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009780308.19e-61PREDICTED: transcription factor bHLH48-like isoform X2
RefseqXP_016505589.19e-61PREDICTED: transcription factor bHLH48-like isoform X2
SwissprotQ8VZ025e-54BH048_ARATH; Transcription factor bHLH48
TrEMBLS8DTU91e-132S8DTU9_9LAMI; Uncharacterized protein (Fragment)
STRINGVIT_08s0007g07870.t017e-55(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40292342
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.22e-55bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]